Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.83□□□□□ -0.36
Usb1Q91W78 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usb1Q91W78 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usb1Q91W78 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC12.83□□□□□ -0.36
Usb1Q91W78 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usb1Q91W78 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Usb1Q91W78 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Usb1Q91W78 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Usb1Q91W78 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.82□□□□□ -0.36
Usb1Q91W78 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.82□□□□□ -0.36
Usb1Q91W78 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.82□□□□□ -0.36
Usb1Q91W78 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Usb1Q91W78 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.81□□□□□ -0.36
Usb1Q91W78 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.81□□□□□ -0.36
Usb1Q91W78 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.81□□□□□ -0.36
Usb1Q91W78 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.81□□□□□ -0.36
Usb1Q91W78 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usb1Q91W78 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usb1Q91W78 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usb1Q91W78 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usb1Q91W78 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.8□□□□□ -0.36
Usb1Q91W78 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usb1Q91W78 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms