Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm11628-201ENSMUST00000117568 171 ntBASIC12.78□□□□□ -0.36
Vsx1Q91V10 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm2546-201ENSMUST00000182630 991 ntBASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.78□□□□□ -0.36
Vsx1Q91V10 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Vsx1Q91V10 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Vsx1Q91V10 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm11930-201ENSMUST00000117788 190 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12616-201ENSMUST00000118594 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12624-201ENSMUST00000177615 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12621-201ENSMUST00000177760 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12615-201ENSMUST00000177970 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12622-201ENSMUST00000177975 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12627-201ENSMUST00000178412 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12625-201ENSMUST00000179122 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12614-201ENSMUST00000179586 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm12613-201ENSMUST00000180323 382 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.77□□□□□ -0.37
Vsx1Q91V10 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Vsx1Q91V10 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms