Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Gm26927-201ENSMUST00000182385 965 ntBASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Gm27682-201ENSMUST00000183930 110 ntBASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Gm9299-201ENSMUST00000206392 1140 ntBASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhb11Q91UZ8 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm37042-201ENSMUST00000193816 581 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm43818-201ENSMUST00000200605 466 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Thoc7-209ENSMUST00000225325 765 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhb11Q91UZ8 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Gm15824-201ENSMUST00000119516 955 ntBASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Gm26185-201ENSMUST00000157692 266 ntBASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Gm43433-201ENSMUST00000196573 481 ntBASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.22□□□□□ -0.29
Pcdhb11Q91UZ8 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms