Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ccdc9Q8VC31 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm17244-201ENSMUST00000192482 3416 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 CT009713.5-203ENSMUST00000224218 2079 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm16026-204ENSMUST00000162652 683 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm43332-201ENSMUST00000202511 1044 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm10154-201ENSMUST00000084445 354 ntBASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ccdc9Q8VC31 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ccdc9Q8VC31 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 CT010486.3-201ENSMUST00000224555 811 ntBASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ccdc9Q8VC31 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm37613-201ENSMUST00000195677 3580 ntBASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm5780-201ENSMUST00000217774 1834 ntBASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.5■□□□□ 0.07
Ccdc9Q8VC31 Gm16198-201ENSMUST00000118766 670 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms