Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.2□□□□□ -0.46
Clrn1Q8K445 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Clrn1Q8K445 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm4984-201ENSMUST00000115987 360 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm24644-201ENSMUST00000157114 139 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm6091-201ENSMUST00000098307 165 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.19□□□□□ -0.46
Clrn1Q8K445 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Clrn1Q8K445 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.19□□□□□ -0.46
Clrn1Q8K445 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Gm8602-201ENSMUST00000184045 607 ntBASIC12.18□□□□□ -0.46
Clrn1Q8K445 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.18□□□□□ -0.46
Clrn1Q8K445 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.18□□□□□ -0.46
Clrn1Q8K445 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Clrn1Q8K445 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.18□□□□□ -0.46
Clrn1Q8K445 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Clrn1Q8K445 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms