Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.14□□□□□ -1.11
Cystm1Q8K353 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Cystm1Q8K353 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Cystm1Q8K353 Gm45751-201ENSMUST00000210185 1573 ntBASIC8.14□□□□□ -1.11
Cystm1Q8K353 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm12428-201ENSMUST00000119844 727 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm5866-201ENSMUST00000177881 973 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm2445-201ENSMUST00000182798 989 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm27989-201ENSMUST00000184721 107 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm37277-201ENSMUST00000194052 1111 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm45484-201ENSMUST00000210310 1141 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 AC125206.2-201ENSMUST00000217454 574 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm9063-201ENSMUST00000223299 582 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Gm14452-201ENSMUST00000118680 1632 ntBASIC8.13□□□□□ -1.11
Cystm1Q8K353 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Cystm1Q8K353 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm6756-201ENSMUST00000180647 1620 ntBASIC8.12□□□□□ -1.11
Cystm1Q8K353 Gm43931-201ENSMUST00000204817 2870 ntBASIC8.12□□□□□ -1.11
Cystm1Q8K353 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
Cystm1Q8K353 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms