Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gm44069-201ENSMUST00000204898 506 ntBASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gm6458-201ENSMUST00000211573 635 ntBASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hmgcs1Q8JZK9 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Gm6152-201ENSMUST00000151704 340 ntBASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgcs1Q8JZK9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Mir686-201ENSMUST00000102174 109 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Gm2495-201ENSMUST00000191160 466 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgcs1Q8JZK9 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms