Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc2Q8CG48 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smc2Q8CG48 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc2Q8CG48 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smc2Q8CG48 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.81□□□□□ -0.04
Smc2Q8CG48 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.81□□□□□ -0.04
Smc2Q8CG48 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.81□□□□□ -0.04
Smc2Q8CG48 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Smc2Q8CG48 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Mir686-201ENSMUST00000102174 109 ntBASIC14.8□□□□□ -0.04
Smc2Q8CG48 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Gm13612-201ENSMUST00000119276 390 ntBASIC14.8□□□□□ -0.04
Smc2Q8CG48 Gm11918-201ENSMUST00000121660 179 ntBASIC14.8□□□□□ -0.04
Smc2Q8CG48 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.8□□□□□ -0.04
Smc2Q8CG48 Ighv8-10-201ENSMUST00000199579 358 ntBASIC14.8□□□□□ -0.04
Smc2Q8CG48 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smc2Q8CG48 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.79□□□□□ -0.04
Smc2Q8CG48 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.79□□□□□ -0.04
Smc2Q8CG48 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Smc2Q8CG48 Gm7287-201ENSMUST00000205267 602 ntBASIC14.79□□□□□ -0.04
Smc2Q8CG48 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.79□□□□□ -0.04
Smc2Q8CG48 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms