Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.02□□□□□ -0.33
Pabpc5Q8C7D3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Gm27331-201ENSMUST00000183705 60 ntBASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Gm37466-201ENSMUST00000195692 652 ntBASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pabpc5Q8C7D3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm6161-201ENSMUST00000121942 1102 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm6254-201ENSMUST00000168178 1072 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm6153-201ENSMUST00000172004 1058 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm4857-201ENSMUST00000192718 785 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm5641-202ENSMUST00000198699 1080 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13□□□□□ -0.33
Pabpc5Q8C7D3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pabpc5Q8C7D3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms