Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim47Q8C0E3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trim47Q8C0E3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Gm8738-201ENSMUST00000172606 329 ntBASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Mir8109-201ENSMUST00000184375 117 ntBASIC14.33□□□□□ -0.12
Trim47Q8C0E3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC14.33□□□□□ -0.12
Trim47Q8C0E3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trim47Q8C0E3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gm15198-201ENSMUST00000117283 177 ntBASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gm11793-201ENSMUST00000120433 981 ntBASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gm12291-201ENSMUST00000121627 311 ntBASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Gm27516-201ENSMUST00000184237 98 ntBASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trim47Q8C0E3 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Trim47Q8C0E3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms