Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm44432-201ENSMUST00000203342 938 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm20586-201ENSMUST00000210122 547 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm45199-201ENSMUST00000207640 1507 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm37785-201ENSMUST00000195783 2408 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm43364-201ENSMUST00000196046 3274 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm15693-201ENSMUST00000120470 637 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm11933-201ENSMUST00000121550 375 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm14840-201ENSMUST00000122135 594 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm25948-201ENSMUST00000175334 112 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Auts2-212ENSMUST00000178555 309 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Mir6956-201ENSMUST00000183598 62 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm7774-201ENSMUST00000200064 533 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Sycp3-201ENSMUST00000020252 1139 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim35Q8C006 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm19095-201ENSMUST00000220533 730 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm5374-201ENSMUST00000222868 657 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 CT025523.1-201ENSMUST00000228318 694 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Gm44792-201ENSMUST00000207008 1628 ntBASIC14.25□□□□□ -0.13
Trim35Q8C006 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trim35Q8C006 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trim35Q8C006 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Sept14-201ENSMUST00000042266 1381 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm6350-201ENSMUST00000195099 1339 ntBASIC14.24□□□□□ -0.13
Trim35Q8C006 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trim35Q8C006 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trim35Q8C006 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms