Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sh3rf2Q8BZT2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm13492-201ENSMUST00000119772 665 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm12291-201ENSMUST00000121627 311 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm38092-201ENSMUST00000195600 653 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm6082-201ENSMUST00000215204 454 ntBASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sh3rf2Q8BZT2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf2Q8BZT2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf2Q8BZT2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Sh3rf2Q8BZT2 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm26956-201ENSMUST00000182176 986 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm30285-201ENSMUST00000214614 422 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm22058-201ENSMUST00000083393 310 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Sh3rf2Q8BZT2 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Sh3rf2Q8BZT2 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms