Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.67□□□□□ -0.38
Ccdc116Q80X53 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm8515-201ENSMUST00000194852 576 ntBASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc116Q80X53 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm12940-202ENSMUST00000137236 1970 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm11803-201ENSMUST00000119966 444 ntBASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm10156-201ENSMUST00000122364 462 ntBASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm6745-201ENSMUST00000199216 526 ntBASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm38671-201ENSMUST00000200573 130 ntBASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc116Q80X53 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms