Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm3890-201ENSMUST00000182416 207 ntBASIC14.94□□□□□ -0.02
Prpf40bQ80W14 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Gm18212-201ENSMUST00000211678 889 ntBASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Prpf40bQ80W14 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.94□□□□□ -0.02
Prpf40bQ80W14 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm11439-201ENSMUST00000118598 409 ntBASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.93□□□□□ -0.02
Prpf40bQ80W14 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Prpf40bQ80W14 Gm8793-201ENSMUST00000183069 1303 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm14028-201ENSMUST00000117434 479 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm12012-201ENSMUST00000118857 1066 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm14277-201ENSMUST00000121195 360 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Prpf40bQ80W14 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms