Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim62Q80V85 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim62Q80V85 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Snord83b-201ENSMUST00000104546 94 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm37424-201ENSMUST00000191727 561 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm32025-201ENSMUST00000217960 307 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim62Q80V85 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.36□□□□□ -0.27
Trim62Q80V85 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim62Q80V85 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm12957-201ENSMUST00000117835 377 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm6652-201ENSMUST00000186414 1070 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm5781-201ENSMUST00000219792 443 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim62Q80V85 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim62Q80V85 Gm24526-201ENSMUST00000082921 158 ntBASIC13.35□□□□□ -0.27
Trim62Q80V85 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Trim62Q80V85 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms