Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp8Q80U87 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13□□□□□ -0.33
Usp8Q80U87 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.99□□□□□ -0.33
Usp8Q80U87 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm38223-201ENSMUST00000194484 695 ntBASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm44855-201ENSMUST00000205725 362 ntBASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm6218-201ENSMUST00000219812 628 ntBASIC12.99□□□□□ -0.33
Usp8Q80U87 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.99□□□□□ -0.33
Usp8Q80U87 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp8Q80U87 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
Usp8Q80U87 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.98□□□□□ -0.33
Usp8Q80U87 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Gm15371-201ENSMUST00000117057 784 ntBASIC12.98□□□□□ -0.33
Usp8Q80U87 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.98□□□□□ -0.33
Usp8Q80U87 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 AC137842.1-201ENSMUST00000227896 2064 ntBASIC12.98□□□□□ -0.33
Usp8Q80U87 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.98□□□□□ -0.33
Usp8Q80U87 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.98□□□□□ -0.33
Usp8Q80U87 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp8Q80U87 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp8Q80U87 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.97□□□□□ -0.33
Usp8Q80U87 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Gm28631-201ENSMUST00000190740 334 ntBASIC12.97□□□□□ -0.33
Usp8Q80U87 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
Usp8Q80U87 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Usp8Q80U87 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Usp8Q80U87 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms