Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Pif1Q80SX8 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Pif1Q80SX8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12□□□□□ -0.49
Pif1Q80SX8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pif1Q80SX8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm44065-201ENSMUST00000203184 3527 ntBASIC12□□□□□ -0.49
Pif1Q80SX8 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12□□□□□ -0.49
Pif1Q80SX8 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm28693-202ENSMUST00000190758 331 ntBASIC12□□□□□ -0.49
Pif1Q80SX8 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm5781-201ENSMUST00000219792 443 ntBASIC12□□□□□ -0.49
Pif1Q80SX8 AC132317.1-201ENSMUST00000227227 962 ntBASIC12□□□□□ -0.49
Pif1Q80SX8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Pif1Q80SX8 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12□□□□□ -0.49
Pif1Q80SX8 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12□□□□□ -0.49
Pif1Q80SX8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.99□□□□□ -0.49
Pif1Q80SX8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm5896-201ENSMUST00000189662 1024 ntBASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm21769-201ENSMUST00000211922 111 ntBASIC11.99□□□□□ -0.49
Pif1Q80SX8 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.99□□□□□ -0.49
Pif1Q80SX8 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Pif1Q80SX8 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Pif1Q80SX8 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms