Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Gm8805-201ENSMUST00000117848 313 ntBASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sp140Q6NSQ5 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm42840-201ENSMUST00000200303 2251 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm11803-201ENSMUST00000119966 444 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm8810-201ENSMUST00000172895 754 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 AC166051.1-201ENSMUST00000214313 210 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Gm14608-201ENSMUST00000120030 1553 ntBASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sp140Q6NSQ5 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm10156-201ENSMUST00000122364 462 ntBASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Sp140Q6NSQ5 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 127.8 ms