Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.73□□□□□ -0.37
VclQ64727 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.73□□□□□ -0.37
VclQ64727 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.73□□□□□ -0.37
VclQ64727 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gm27682-201ENSMUST00000183930 110 ntBASIC12.73□□□□□ -0.37
VclQ64727 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
VclQ64727 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.73□□□□□ -0.37
VclQ64727 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.73□□□□□ -0.37
VclQ64727 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.73□□□□□ -0.37
VclQ64727 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.73□□□□□ -0.37
VclQ64727 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
VclQ64727 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.73□□□□□ -0.37
VclQ64727 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VclQ64727 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.72□□□□□ -0.37
VclQ64727 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.72□□□□□ -0.37
VclQ64727 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
VclQ64727 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.72□□□□□ -0.37
VclQ64727 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.72□□□□□ -0.37
VclQ64727 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.72□□□□□ -0.37
VclQ64727 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.72□□□□□ -0.37
VclQ64727 Gm4768-201ENSMUST00000206199 686 ntBASIC12.72□□□□□ -0.37
VclQ64727 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.72□□□□□ -0.37
VclQ64727 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
VclQ64727 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
VclQ64727 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
VclQ64727 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.71□□□□□ -0.37
VclQ64727 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.71□□□□□ -0.37
VclQ64727 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
VclQ64727 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms