Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.47□□□□□ -0.41
Sdc3Q64519 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sdc3Q64519 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.46□□□□□ -0.41
Sdc3Q64519 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm23931-201ENSMUST00000103842 109 ntBASIC12.46□□□□□ -0.41
Sdc3Q64519 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.46□□□□□ -0.41
Sdc3Q64519 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm10478-201ENSMUST00000084451 396 ntBASIC12.46□□□□□ -0.41
Sdc3Q64519 Gm10268-201ENSMUST00000085340 555 ntBASIC12.46□□□□□ -0.41
Sdc3Q64519 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Sdc3Q64519 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sdc3Q64519 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc3Q64519 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sdc3Q64519 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sdc3Q64519 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sdc3Q64519 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Sdc3Q64519 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Paupar-201ENSMUST00000194826 3482 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm7029-201ENSMUST00000173226 450 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.45□□□□□ -0.42
Sdc3Q64519 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm42693-201ENSMUST00000196779 631 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm6007-201ENSMUST00000208170 823 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm45880-201ENSMUST00000213041 853 ntBASIC12.45□□□□□ -0.42
Sdc3Q64519 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
Sdc3Q64519 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.45□□□□□ -0.42
Sdc3Q64519 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sdc3Q64519 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm5187-201ENSMUST00000117317 991 ntBASIC12.44□□□□□ -0.42
Sdc3Q64519 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.44□□□□□ -0.42
Sdc3Q64519 Gm6458-201ENSMUST00000211573 635 ntBASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms