Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Mir5120-201ENSMUST00000175020 78 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC16.39■□□□□ 0.21
Clcn1Q64347 AC135669.1-202ENSMUST00000216742 540 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gm5466-201ENSMUST00000119395 1890 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gm4366-201ENSMUST00000201488 1342 ntBASIC16.39■□□□□ 0.21
Clcn1Q64347 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Clcn1Q64347 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Clcn1Q64347 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC16.38■□□□□ 0.21
Clcn1Q64347 AC123857.2-201ENSMUST00000225756 1582 ntBASIC16.38■□□□□ 0.21
Clcn1Q64347 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm38317-201ENSMUST00000195564 343 ntBASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm43138-201ENSMUST00000199123 708 ntBASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC16.38■□□□□ 0.21
Clcn1Q64347 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.38■□□□□ 0.21
Clcn1Q64347 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Clcn1Q64347 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Clcn1Q64347 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.37■□□□□ 0.21
Clcn1Q64347 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Gm14208-201ENSMUST00000119645 678 ntBASIC16.37■□□□□ 0.21
Clcn1Q64347 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 AA914427-201ENSMUST00000193194 1166 ntBASIC16.37■□□□□ 0.21
Clcn1Q64347 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC16.37■□□□□ 0.21
Clcn1Q64347 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Clcn1Q64347 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Clcn1Q64347 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Clcn1Q64347 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms