Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm7498-201ENSMUST00000203282 1084 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm18307-201ENSMUST00000206864 949 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 AC151904.4-201ENSMUST00000219868 1319 ntBASIC9.73□□□□□ -0.85
Foxc1Q61572 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC9.73□□□□□ -0.85
Foxc1Q61572 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Foxc1Q61572 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 AC161252.3-201ENSMUST00000225465 1549 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm42706-201ENSMUST00000199733 1910 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Tardbp-209ENSMUST00000165113 6495 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm13829-201ENSMUST00000119600 138 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm12960-201ENSMUST00000120017 1066 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm6027-201ENSMUST00000121467 756 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Vmn1r-ps17-201ENSMUST00000175797 894 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm9499-201ENSMUST00000180888 964 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm36966-201ENSMUST00000192217 413 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm43094-201ENSMUST00000196549 921 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm4870-201ENSMUST00000198525 1251 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Elobl-201ENSMUST00000061938 819 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Foxc1Q61572 AC154527.2-201ENSMUST00000225256 1466 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Foxc1Q61572 Gm42822-201ENSMUST00000200507 1529 ntBASIC9.72□□□□□ -0.85
Foxc1Q61572 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms