Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.62□□□□□ -0.39
Vsx2Q61412 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx2Q61412 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.61□□□□□ -0.39
Vsx2Q61412 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Proscos-202ENSMUST00000178990 666 ntBASIC12.61□□□□□ -0.39
Vsx2Q61412 Gm24196-201ENSMUST00000179161 110 ntBASIC12.61□□□□□ -0.39
Vsx2Q61412 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx2Q61412 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.61□□□□□ -0.39
Vsx2Q61412 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.61□□□□□ -0.39
Vsx2Q61412 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx2Q61412 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Vsx2Q61412 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm14350-201ENSMUST00000116642 640 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm6447-201ENSMUST00000118905 835 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm29649-201ENSMUST00000185649 419 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.6□□□□□ -0.39
Vsx2Q61412 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm16372-201ENSMUST00000073088 450 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.6□□□□□ -0.39
Vsx2Q61412 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx2Q61412 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Vsx2Q61412 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.59□□□□□ -0.39
Vsx2Q61412 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Vsx2Q61412 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms