Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Cln3Q61124 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.11□□□□□ -0.15
Cln3Q61124 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm16481-201ENSMUST00000119074 1227 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Gm13315-201ENSMUST00000120376 991 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm24749-201ENSMUST00000157838 343 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm20426-201ENSMUST00000173657 440 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm27552-201ENSMUST00000183351 62 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Gm27844-201ENSMUST00000183613 62 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 AC125209.1-201ENSMUST00000225812 766 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Cln3Q61124 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.11□□□□□ -0.15
Cln3Q61124 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Cln3Q61124 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.11□□□□□ -0.15
Cln3Q61124 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Cln3Q61124 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Gm13296-201ENSMUST00000117854 997 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Gm14263-201ENSMUST00000117955 746 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Gm11331-201ENSMUST00000119764 288 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Gm22334-201ENSMUST00000158070 133 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Rprl1-202ENSMUST00000198476 238 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Gm45433-201ENSMUST00000209386 247 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Cln3Q61124 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.1□□□□□ -0.15
Cln3Q61124 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Cln3Q61124 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Cln3Q61124 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cln3Q61124 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cln3Q61124 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms