Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Gm4986-201ENSMUST00000119731 549 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Gm7895-201ENSMUST00000187459 1173 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Gm6334-201ENSMUST00000207083 228 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Gm10608-202ENSMUST00000213924 676 ntBASIC13.76□□□□□ -0.21
Shroom1Q5SX79 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Shroom1Q5SX79 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm15370-201ENSMUST00000117158 253 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm12539-201ENSMUST00000121549 1098 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm26083-201ENSMUST00000157904 193 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm37489-201ENSMUST00000191883 159 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm6621-201ENSMUST00000193251 772 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm24526-201ENSMUST00000082921 158 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Shroom1Q5SX79 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Gm24255-201ENSMUST00000104481 128 ntBASIC13.74□□□□□ -0.21
Shroom1Q5SX79 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Gm2991-201ENSMUST00000173338 480 ntBASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Shroom1Q5SX79 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Shroom1Q5SX79 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms