Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rnf20Q5DTM8 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Gm24196-201ENSMUST00000179161 110 ntBASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rnf20Q5DTM8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm8805-201ENSMUST00000117848 313 ntBASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Gm43045-201ENSMUST00000198725 2095 ntBASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rnf20Q5DTM8 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gm12291-201ENSMUST00000121627 311 ntBASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Gm8652-201ENSMUST00000181363 964 ntBASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.37■□□□□ 0.05
Rnf20Q5DTM8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms