Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm8768-201ENSMUST00000220020 826 ntBASIC13.04□□□□□ -0.32
Bdp1Q571C7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.04□□□□□ -0.32
Bdp1Q571C7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm43520-201ENSMUST00000197996 164 ntBASIC13.04□□□□□ -0.32
Bdp1Q571C7 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Bdp1Q571C7 Gm26013-201ENSMUST00000104404 119 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm7851-201ENSMUST00000117574 323 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm1848-201ENSMUST00000120711 789 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm18201-201ENSMUST00000174735 875 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm5513-201ENSMUST00000072982 1218 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm13182-201ENSMUST00000122241 312 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Ighv1-86-201ENSMUST00000200562 353 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm43962-201ENSMUST00000203898 190 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC13.03□□□□□ -0.32
Bdp1Q571C7 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Bdp1Q571C7 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Gm12783-201ENSMUST00000121425 397 ntBASIC13.02□□□□□ -0.32
Bdp1Q571C7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Gm8100-201ENSMUST00000182906 988 ntBASIC13.02□□□□□ -0.32
Bdp1Q571C7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Bdp1Q571C7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Gm9230-201ENSMUST00000188228 532 ntBASIC13.02□□□□□ -0.33
Bdp1Q571C7 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
Bdp1Q571C7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms