Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 AC132317.1-201ENSMUST00000227227 962 ntBASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rc3h1Q4VGL6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Rc3h1Q4VGL6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm13875-201ENSMUST00000120162 282 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm19963-201ENSMUST00000208413 1255 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Gm22058-201ENSMUST00000083393 310 ntBASIC14.91□□□□□ -0.02
Rc3h1Q4VGL6 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms