Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm13875-201ENSMUST00000120162 282 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm15547-201ENSMUST00000122152 333 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm27046-201ENSMUST00000182160 463 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 Gm28450-201ENSMUST00000187349 638 ntBASIC15.06■□□□□ 0
Ddx49Q4FZF3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ddx49Q4FZF3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.05■□□□□ 0
Ddx49Q4FZF3 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ddx49Q4FZF3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm26361-201ENSMUST00000158868 186 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm22121-201ENSMUST00000175148 54 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm27023-201ENSMUST00000182372 285 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm5904-201ENSMUST00000210286 865 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm8228-201ENSMUST00000189949 2192 ntBASIC15.05■□□□□ -0
Ddx49Q4FZF3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ddx49Q4FZF3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm11331-201ENSMUST00000119764 288 ntBASIC15.04■□□□□ -0
Ddx49Q4FZF3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC15.04■□□□□ -0
Ddx49Q4FZF3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.04■□□□□ -0
Ddx49Q4FZF3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms