Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 AC154305.4-201ENSMUST00000224520 614 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Gm10288-201ENSMUST00000084614 537 ntBASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shank3Q4ACU6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm17889-201ENSMUST00000198410 598 ntBASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 AC151275.1-201ENSMUST00000224870 585 ntBASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shank3Q4ACU6 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gm8343-201ENSMUST00000182705 994 ntBASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gm37458-201ENSMUST00000194055 410 ntBASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gm6905-201ENSMUST00000205729 511 ntBASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Shank3Q4ACU6 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm14724-201ENSMUST00000118400 537 ntBASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Mir1901-201ENSMUST00000122616 78 ntBASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm8100-201ENSMUST00000182906 988 ntBASIC15.65■□□□□ 0.1
Shank3Q4ACU6 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Gm3765-201ENSMUST00000130985 1447 ntBASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Shank3Q4ACU6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.64■□□□□ 0.09
Shank3Q4ACU6 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Shank3Q4ACU6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Shank3Q4ACU6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms