Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Spg11Q3UHA3 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm39404-201ENSMUST00000216350 313 ntBASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 AC165260.2-203ENSMUST00000224237 336 ntBASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm23675-201ENSMUST00000157311 125 ntBASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Spg11Q3UHA3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm23596-201ENSMUST00000104304 132 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm16071-201ENSMUST00000119589 793 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Mir6407-201ENSMUST00000184510 101 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm17826-201ENSMUST00000189720 798 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm19994-201ENSMUST00000217086 586 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm26368-201ENSMUST00000157826 118 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm23363-201ENSMUST00000175024 79 ntBASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Spg11Q3UHA3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms