Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Chd8Q09XV5 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm45094-201ENSMUST00000207013 617 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm24279-201ENSMUST00000104236 131 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm11949-201ENSMUST00000117640 372 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 AA623943-201ENSMUST00000121794 354 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm24398-201ENSMUST00000157870 109 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.47□□□□□ -0.57
Chd8Q09XV5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC11.47□□□□□ -0.57
Chd8Q09XV5 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Chd8Q09XV5 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Gm25766-201ENSMUST00000104101 131 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Rhox3d-ps-201ENSMUST00000119181 825 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 Defa-ps16-201ENSMUST00000121939 171 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 Gm17944-201ENSMUST00000186351 643 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.46□□□□□ -0.57
Chd8Q09XV5 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Chd8Q09XV5 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm14999-201ENSMUST00000121039 624 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm16459-201ENSMUST00000121443 686 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm37197-201ENSMUST00000195607 401 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC11.46□□□□□ -0.58
Chd8Q09XV5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.46□□□□□ -0.58
Chd8Q09XV5 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.46□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms