Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.82□□□□□ -0.2
VcpQ01853 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Mir874-201ENSMUST00000104769 76 ntBASIC13.82□□□□□ -0.2
VcpQ01853 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.82□□□□□ -0.2
VcpQ01853 Gm12203-201ENSMUST00000118235 598 ntBASIC13.82□□□□□ -0.2
VcpQ01853 Gm12209-201ENSMUST00000120089 596 ntBASIC13.82□□□□□ -0.2
VcpQ01853 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.82□□□□□ -0.2
VcpQ01853 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VcpQ01853 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VcpQ01853 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VcpQ01853 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.82□□□□□ -0.2
VcpQ01853 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
VcpQ01853 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VcpQ01853 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VcpQ01853 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VcpQ01853 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VcpQ01853 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
VcpQ01853 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Gm24255-201ENSMUST00000104481 128 ntBASIC13.81□□□□□ -0.2
VcpQ01853 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC13.81□□□□□ -0.2
VcpQ01853 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC13.81□□□□□ -0.2
VcpQ01853 Gm4271-201ENSMUST00000174444 973 ntBASIC13.81□□□□□ -0.2
VcpQ01853 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.81□□□□□ -0.2
VcpQ01853 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
VcpQ01853 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VcpQ01853 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
VcpQ01853 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VcpQ01853 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VcpQ01853 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.81□□□□□ -0.2
VcpQ01853 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VcpQ01853 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.8□□□□□ -0.2
VcpQ01853 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VcpQ01853 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
VcpQ01853 Gm14381-201ENSMUST00000122105 414 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Gm10156-201ENSMUST00000122364 462 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.8□□□□□ -0.2
VcpQ01853 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Gm6152-201ENSMUST00000151704 340 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Gm2991-201ENSMUST00000173338 480 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC13.8□□□□□ -0.2
VcpQ01853 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Gm10608-202ENSMUST00000213924 676 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Snora73a-201ENSMUST00000082453 205 ntBASIC13.8□□□□□ -0.2
VcpQ01853 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VcpQ01853 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VcpQ01853 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms