Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.33□□□□□ -0.92
Notch1Q01705 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Notch1Q01705 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC9.33□□□□□ -0.92
Notch1Q01705 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC9.33□□□□□ -0.92
Notch1Q01705 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.33□□□□□ -0.92
Notch1Q01705 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.33□□□□□ -0.92
Notch1Q01705 Gm12165-201ENSMUST00000117047 342 ntBASIC9.33□□□□□ -0.92
Notch1Q01705 Gm13736-201ENSMUST00000119272 253 ntBASIC9.33□□□□□ -0.92
Notch1Q01705 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Notch1Q01705 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.33□□□□□ -0.92
Notch1Q01705 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.33□□□□□ -0.92
Notch1Q01705 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Notch1Q01705 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Notch1Q01705 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC9.33□□□□□ -0.92
Notch1Q01705 Gm22058-201ENSMUST00000083393 310 ntBASIC9.33□□□□□ -0.92
Notch1Q01705 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Notch1Q01705 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.33□□□□□ -0.92
Notch1Q01705 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC9.32□□□□□ -0.92
Notch1Q01705 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Notch1Q01705 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Notch1Q01705 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm9555-201ENSMUST00000200908 583 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC9.32□□□□□ -0.92
Notch1Q01705 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Notch1Q01705 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm5639-201ENSMUST00000122305 2403 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm14371-201ENSMUST00000138925 1518 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm23949-201ENSMUST00000104027 127 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm12058-201ENSMUST00000118614 437 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Gm11450-201ENSMUST00000121144 333 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC9.32□□□□□ -0.92
Notch1Q01705 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm20392-201ENSMUST00000173047 701 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Gm38210-201ENSMUST00000191944 809 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm45691-201ENSMUST00000206905 1120 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch1Q01705 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Gm42918-201ENSMUST00000199249 1580 ntBASIC9.32□□□□□ -0.92
Notch1Q01705 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch1Q01705 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch1Q01705 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.31□□□□□ -0.92
Notch1Q01705 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms