Protein–RNA interactions for Protein: Q00623

Apoa1, Apolipoprotein A-I, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Apoa1Q00623 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.25□□□□□ -0.45
Apoa1Q00623 Gm24245-201ENSMUST00000157318 57 ntBASIC12.25□□□□□ -0.45
Apoa1Q00623 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.25□□□□□ -0.45
Apoa1Q00623 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Apoa1Q00623 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.24□□□□□ -0.45
Apoa1Q00623 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.24□□□□□ -0.45
Apoa1Q00623 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.24□□□□□ -0.45
Apoa1Q00623 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.24□□□□□ -0.45
Apoa1Q00623 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.24□□□□□ -0.45
Apoa1Q00623 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Apoa1Q00623 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.23□□□□□ -0.45
Apoa1Q00623 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm13616-201ENSMUST00000120600 222 ntBASIC12.23□□□□□ -0.45
Apoa1Q00623 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.23□□□□□ -0.45
Apoa1Q00623 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.23□□□□□ -0.45
Apoa1Q00623 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Apoa1Q00623 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Apoa1Q00623 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms