Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm5523-201ENSMUST00000180415 997 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm44651-201ENSMUST00000207343 372 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm45433-201ENSMUST00000209386 247 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 CT025694.1-201ENSMUST00000226188 934 ntBASIC16.14■□□□□ 0.17
Nkx2-3P97334 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-3P97334 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx2-3P97334 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Gm42863-201ENSMUST00000197875 2958 ntBASIC16.13■□□□□ 0.17
Nkx2-3P97334 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC16.13■□□□□ 0.17
Nkx2-3P97334 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Gm43947-201ENSMUST00000203019 959 ntBASIC16.13■□□□□ 0.17
Nkx2-3P97334 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Gm10076-201ENSMUST00000073238 384 ntBASIC16.13■□□□□ 0.17
Nkx2-3P97334 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-3P97334 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm13296-201ENSMUST00000117854 997 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 n-R5s14-201ENSMUST00000122688 107 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm23699-201ENSMUST00000158835 135 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm9555-201ENSMUST00000200908 583 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm44100-201ENSMUST00000204329 436 ntBASIC16.12■□□□□ 0.17
Nkx2-3P97334 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-3P97334 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Gm37986-201ENSMUST00000193285 383 ntBASIC16.11■□□□□ 0.17
Nkx2-3P97334 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-3P97334 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-3P97334 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms