Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43cP86449 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trim43cP86449 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim43cP86449 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm17208-201ENSMUST00000168388 535 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim43cP86449 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43cP86449 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.05□□□□□ -0.16
Trim43cP86449 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43cP86449 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC14.05□□□□□ -0.16
Trim43cP86449 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.05□□□□□ -0.16
Trim43cP86449 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trim43cP86449 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trim43cP86449 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Trim43cP86449 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.04□□□□□ -0.16
Trim43cP86449 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.04□□□□□ -0.16
Trim43cP86449 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.04□□□□□ -0.16
Trim43cP86449 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.04□□□□□ -0.16
Trim43cP86449 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC14.04□□□□□ -0.16
Trim43cP86449 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.04□□□□□ -0.16
Trim43cP86449 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trim43cP86449 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 AC154747.3-201ENSMUST00000224471 3470 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trim43cP86449 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Trim43cP86449 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Gm16296-201ENSMUST00000159905 325 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Gm38092-201ENSMUST00000195600 653 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Gm4768-201ENSMUST00000206199 686 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trim43cP86449 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.03□□□□□ -0.16
Trim43cP86449 Gm19163-201ENSMUST00000223313 780 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.03□□□□□ -0.16
Trim43cP86449 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trim43cP86449 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms