Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.53□□□□□ -0.56
H3f3aP84244 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
H3f3aP84244 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.53□□□□□ -0.56
H3f3aP84244 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC11.52□□□□□ -0.56
H3f3aP84244 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.52□□□□□ -0.56
H3f3aP84244 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.52□□□□□ -0.56
H3f3aP84244 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
H3f3aP84244 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.52□□□□□ -0.57
H3f3aP84244 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.52□□□□□ -0.57
H3f3aP84244 Gm13226-201ENSMUST00000117838 404 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Gm12291-201ENSMUST00000121627 311 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.52□□□□□ -0.57
H3f3aP84244 Gm4768-201ENSMUST00000206199 686 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 AC166051.1-201ENSMUST00000214313 210 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
H3f3aP84244 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.52□□□□□ -0.57
H3f3aP84244 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
H3f3aP84244 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
H3f3aP84244 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.51□□□□□ -0.57
H3f3aP84244 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.51□□□□□ -0.57
H3f3aP84244 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Gm14660-201ENSMUST00000119809 575 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Gm1335-201ENSMUST00000121653 386 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.51□□□□□ -0.57
H3f3aP84244 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.51□□□□□ -0.57
H3f3aP84244 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Gm5186-201ENSMUST00000218781 920 ntBASIC11.51□□□□□ -0.57
H3f3aP84244 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.51□□□□□ -0.57
H3f3aP84244 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
H3f3aP84244 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
H3f3aP84244 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms