Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.75□□□□□ -0.37
Shox2P70390 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shox2P70390 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm25287-201ENSMUST00000103846 110 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm22918-201ENSMUST00000103855 110 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 Gm11745-201ENSMUST00000121669 448 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Rprl2-201ENSMUST00000157150 290 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Mir8117-201ENSMUST00000184773 107 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm38144-201ENSMUST00000192790 465 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm5864-201ENSMUST00000202263 970 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Gm18905-201ENSMUST00000205454 928 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.74□□□□□ -0.37
Shox2P70390 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Shox2P70390 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shox2P70390 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shox2P70390 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Shox2P70390 Gm5161-201ENSMUST00000075243 853 ntBASIC12.74□□□□□ -0.37
Shox2P70390 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Shox2P70390 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shox2P70390 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shox2P70390 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.73□□□□□ -0.37
Shox2P70390 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.73□□□□□ -0.37
Shox2P70390 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Shox2P70390 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC12.73□□□□□ -0.37
Shox2P70390 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.73□□□□□ -0.37
Shox2P70390 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.73□□□□□ -0.37
Shox2P70390 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.73□□□□□ -0.37
Shox2P70390 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.73□□□□□ -0.37
Shox2P70390 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.73□□□□□ -0.37
Shox2P70390 Gm17971-201ENSMUST00000190239 806 ntBASIC12.73□□□□□ -0.37
Shox2P70390 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.73□□□□□ -0.37
Shox2P70390 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.73□□□□□ -0.37
Shox2P70390 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.73□□□□□ -0.37
Shox2P70390 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Shox2P70390 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Shox2P70390 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Shox2P70390 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms