Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Stra8P70278 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Gm6161-201ENSMUST00000121942 1102 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Gm15376-201ENSMUST00000122258 783 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 Gm6254-201ENSMUST00000168178 1072 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Gm6153-201ENSMUST00000172004 1058 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Stra8P70278 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Stra8P70278 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Gm37917-201ENSMUST00000194711 392 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Gm5641-202ENSMUST00000198699 1080 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.85■□□□□ 0.45
Stra8P70278 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Stra8P70278 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Stra8P70278 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
Stra8P70278 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.84■□□□□ 0.45
Stra8P70278 Gm45266-201ENSMUST00000210111 2173 ntBASIC17.84■□□□□ 0.45
Stra8P70278 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.84■□□□□ 0.45
Stra8P70278 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.84■□□□□ 0.45
Stra8P70278 Mir6392-201ENSMUST00000184924 108 ntBASIC17.84■□□□□ 0.45
Stra8P70278 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Stra8P70278 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC17.84■□□□□ 0.45
Stra8P70278 Gm19220-201ENSMUST00000222682 803 ntBASIC17.84■□□□□ 0.45
Stra8P70278 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Stra8P70278 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Stra8P70278 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC17.84■□□□□ 0.45
Stra8P70278 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Stra8P70278 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Stra8P70278 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC17.83■□□□□ 0.45
Stra8P70278 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 AC164107.1-201ENSMUST00000227730 2161 ntBASIC17.83■□□□□ 0.45
Stra8P70278 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Stra8P70278 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC17.83■□□□□ 0.44
Stra8P70278 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Gm19078-201ENSMUST00000206311 727 ntBASIC17.83■□□□□ 0.44
Stra8P70278 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Stra8P70278 AC155258.1-201ENSMUST00000219303 253 ntBASIC17.83■□□□□ 0.44
Stra8P70278 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.83■□□□□ 0.44
Stra8P70278 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC17.83■□□□□ 0.44
Stra8P70278 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Stra8P70278 Gm37472-201ENSMUST00000192342 4052 ntBASIC17.83■□□□□ 0.44
Stra8P70278 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC17.83■□□□□ 0.44
Stra8P70278 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Nudt18-202ENSMUST00000228554 3619 ntBASIC17.82■□□□□ 0.44
Stra8P70278 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Stra8P70278 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC17.82■□□□□ 0.44
Stra8P70278 Gm11524-201ENSMUST00000119349 807 ntBASIC17.82■□□□□ 0.44
Stra8P70278 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.82■□□□□ 0.44
Stra8P70278 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC17.82■□□□□ 0.44
Stra8P70278 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms