Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 BC001981-202ENSMUST00000191393 1545 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC12.8□□□□□ -0.36
Crnkl1P63154 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Mir8102-201ENSMUST00000184148 139 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm27680-201ENSMUST00000184192 160 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm27989-201ENSMUST00000184721 107 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.8□□□□□ -0.36
Crnkl1P63154 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Crnkl1P63154 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Crnkl1P63154 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Gm27306-201ENSMUST00000183970 107 ntBASIC12.79□□□□□ -0.36
Crnkl1P63154 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Crnkl1P63154 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Crnkl1P63154 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Crnkl1P63154 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.78□□□□□ -0.36
Crnkl1P63154 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Crnkl1P63154 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.78□□□□□ -0.36
Crnkl1P63154 Gm45841-201ENSMUST00000207700 164 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 179.2 ms