Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Nphp4P59240 Gm8385-201ENSMUST00000058999 643 ntBASIC17.33■□□□□ 0.36
Nphp4P59240 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.33■□□□□ 0.36
Nphp4P59240 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Nphp4P59240 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC17.33■□□□□ 0.36
Nphp4P59240 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC17.33■□□□□ 0.36
Nphp4P59240 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nphp4P59240 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC17.32■□□□□ 0.36
Nphp4P59240 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Gm14277-201ENSMUST00000121195 360 ntBASIC17.32■□□□□ 0.36
Nphp4P59240 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Nphp4P59240 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
Nphp4P59240 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.32■□□□□ 0.36
Nphp4P59240 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC17.32■□□□□ 0.36
Nphp4P59240 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC17.32■□□□□ 0.36
Nphp4P59240 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Nphp4P59240 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Gm26035-201ENSMUST00000083065 308 ntBASIC17.32■□□□□ 0.36
Nphp4P59240 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC17.32■□□□□ 0.36
Nphp4P59240 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nphp4P59240 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nphp4P59240 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Crry-ps-201ENSMUST00000079090 1309 ntBASIC17.31■□□□□ 0.36
Nphp4P59240 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Nphp4P59240 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Nphp4P59240 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC17.31■□□□□ 0.36
Nphp4P59240 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Nphp4P59240 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC17.31■□□□□ 0.36
Nphp4P59240 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nphp4P59240 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nphp4P59240 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nphp4P59240 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Nphp4P59240 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.31■□□□□ 0.36
Nphp4P59240 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nphp4P59240 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Gm24934-201ENSMUST00000103764 111 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Nphp4P59240 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC17.3■□□□□ 0.36
Nphp4P59240 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Gm45342-201ENSMUST00000210903 1363 ntBASIC17.3■□□□□ 0.36
Nphp4P59240 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nphp4P59240 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nphp4P59240 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms