Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx6P54823 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ddx6P54823 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ddx6P54823 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Gm13665-201ENSMUST00000120830 528 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ddx6P54823 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Gm16296-201ENSMUST00000159905 325 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Ddx6P54823 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ddx6P54823 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Gm3096-201ENSMUST00000185770 364 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Gm5363-201ENSMUST00000211927 938 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Ddx6P54823 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx6P54823 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.12□□□□□ -0.31
Ddx6P54823 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.11□□□□□ -0.31
Ddx6P54823 Gm14109-201ENSMUST00000118814 309 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.11□□□□□ -0.31
Ddx6P54823 Gm25043-201ENSMUST00000158604 212 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Ddx6P54823 Rn7s1-201ENSMUST00000174924 300 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Rn7s2-201ENSMUST00000175032 300 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Gm26461-201ENSMUST00000175064 290 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Gm18827-201ENSMUST00000188341 790 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.11□□□□□ -0.31
Ddx6P54823 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 CT030182.1-201ENSMUST00000225935 533 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.11□□□□□ -0.31
Ddx6P54823 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx6P54823 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx6P54823 AC113441.2-201ENSMUST00000221538 1468 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ddx6P54823 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Gm12997-201ENSMUST00000120207 640 ntBASIC13.1□□□□□ -0.31
Ddx6P54823 Gm13813-201ENSMUST00000120998 787 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms