Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacnb3P54285 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cacnb3P54285 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cacnb3P54285 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.03■□□□□ -0
Cacnb3P54285 Gm13665-201ENSMUST00000120830 528 ntBASIC15.03■□□□□ -0
Cacnb3P54285 Gm12291-201ENSMUST00000121627 311 ntBASIC15.03■□□□□ -0
Cacnb3P54285 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Cacnb3P54285 Gm26361-201ENSMUST00000158868 186 ntBASIC15.03■□□□□ -0
Cacnb3P54285 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC15.03■□□□□ -0
Cacnb3P54285 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC15.03■□□□□ -0
Cacnb3P54285 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.03■□□□□ -0
Cacnb3P54285 Gm37201-201ENSMUST00000191845 523 ntBASIC15.03■□□□□ -0
Cacnb3P54285 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Mir339-201ENSMUST00000083659 96 ntBASIC15.03■□□□□ -0
Cacnb3P54285 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Cacnb3P54285 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cacnb3P54285 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Cacnb3P54285 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC15.02■□□□□ -0
Cacnb3P54285 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.02■□□□□ -0
Cacnb3P54285 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacnb3P54285 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC15.02■□□□□ -0
Cacnb3P54285 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC15.02■□□□□ -0
Cacnb3P54285 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC15.02■□□□□ -0
Cacnb3P54285 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cacnb3P54285 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Gm44401-201ENSMUST00000204462 2375 ntBASIC15.02□□□□□ -0.01
Cacnb3P54285 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacnb3P54285 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.02□□□□□ -0.01
Cacnb3P54285 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.01□□□□□ -0.01
Cacnb3P54285 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm7857-201ENSMUST00000117957 358 ntBASIC15.01□□□□□ -0.01
Cacnb3P54285 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC15.01□□□□□ -0.01
Cacnb3P54285 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Cacnb3P54285 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacnb3P54285 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm28450-201ENSMUST00000187349 638 ntBASIC15.01□□□□□ -0.01
Cacnb3P54285 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacnb3P54285 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacnb3P54285 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacnb3P54285 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms