Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.78□□□□□ -0.36
Pdx1P52946 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm15824-201ENSMUST00000119516 955 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Gm11425-201ENSMUST00000119608 498 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Gm14704-201ENSMUST00000120300 874 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Gm1335-201ENSMUST00000121653 386 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.78□□□□□ -0.36
Pdx1P52946 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm17208-201ENSMUST00000168388 535 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm37042-201ENSMUST00000193816 581 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Gm43818-201ENSMUST00000200605 466 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm9396-201ENSMUST00000076703 567 ntBASIC12.78□□□□□ -0.36
Pdx1P52946 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pdx1P52946 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pdx1P52946 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Pdx1P52946 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.77□□□□□ -0.36
Pdx1P52946 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.77□□□□□ -0.36
Pdx1P52946 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.77□□□□□ -0.36
Pdx1P52946 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Pdx1P52946 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Pdx1P52946 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Pdx1P52946 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Pdx1P52946 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.77□□□□□ -0.37
Pdx1P52946 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.77□□□□□ -0.37
Pdx1P52946 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.77□□□□□ -0.37
Pdx1P52946 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.77□□□□□ -0.37
Pdx1P52946 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Gm43433-201ENSMUST00000196573 481 ntBASIC12.77□□□□□ -0.37
Pdx1P52946 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Gm10268-201ENSMUST00000085340 555 ntBASIC12.77□□□□□ -0.37
Pdx1P52946 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Pdx1P52946 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.77□□□□□ -0.37
Pdx1P52946 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.77□□□□□ -0.37
Pdx1P52946 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Pdx1P52946 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Pdx1P52946 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Pdx1P52946 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.76□□□□□ -0.37
Pdx1P52946 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Snord83b-201ENSMUST00000104546 94 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.76□□□□□ -0.37
Pdx1P52946 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Pdx1P52946 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.76□□□□□ -0.37
Pdx1P52946 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.76□□□□□ -0.37
Pdx1P52946 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms