Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.5□□□□□ -0.41
Sox18P43680 Gm26474-201ENSMUST00000116762 122 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Gm11930-201ENSMUST00000117788 190 ntBASIC12.5□□□□□ -0.41
Sox18P43680 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Gm26361-201ENSMUST00000158868 186 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC12.5□□□□□ -0.41
Sox18P43680 Gm37073-201ENSMUST00000192469 1222 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Gm43058-201ENSMUST00000197645 625 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Gm6312-201ENSMUST00000204060 1194 ntBASIC12.5□□□□□ -0.41
Sox18P43680 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.5□□□□□ -0.41
Sox18P43680 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Gm8385-201ENSMUST00000058999 643 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.5□□□□□ -0.41
Sox18P43680 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Sox18P43680 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Sox18P43680 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Sox18P43680 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.49□□□□□ -0.41
Sox18P43680 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.49□□□□□ -0.41
Sox18P43680 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Sox18P43680 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sox18P43680 Gm5051-201ENSMUST00000204085 485 ntBASIC12.49□□□□□ -0.41
Sox18P43680 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Sox18P43680 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.49□□□□□ -0.41
Sox18P43680 CT025525.2-201ENSMUST00000227743 423 ntBASIC12.49□□□□□ -0.41
Sox18P43680 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Sox18P43680 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Sox18P43680 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.48□□□□□ -0.41
Sox18P43680 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.48□□□□□ -0.41
Sox18P43680 Gm11531-201ENSMUST00000117614 555 ntBASIC12.48□□□□□ -0.41
Sox18P43680 Gm8312-201ENSMUST00000119380 618 ntBASIC12.48□□□□□ -0.41
Sox18P43680 Gm14665-201ENSMUST00000122294 557 ntBASIC12.48□□□□□ -0.41
Sox18P43680 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sox18P43680 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Sox18P43680 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms