Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tnfsf4P43488 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm15920-201ENSMUST00000118998 402 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm12341-201ENSMUST00000119724 503 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm16215-201ENSMUST00000161990 637 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm44397-201ENSMUST00000195950 113 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm20949-201ENSMUST00000206478 952 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm18307-201ENSMUST00000206864 949 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm6218-201ENSMUST00000219812 628 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Itm2b-204ENSMUST00000228637 783 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.47□□□□□ -0.41
Tnfsf4P43488 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.47□□□□□ -0.41
Tnfsf4P43488 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tnfsf4P43488 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.46□□□□□ -0.41
Tnfsf4P43488 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Mir686-201ENSMUST00000102174 109 ntBASIC12.46□□□□□ -0.41
Tnfsf4P43488 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Gm14350-201ENSMUST00000116642 640 ntBASIC12.46□□□□□ -0.41
Tnfsf4P43488 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Tnfsf4P43488 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Tnfsf4P43488 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms