Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.62□□□□□ -0.71
Timp3P39876 Gm5187-201ENSMUST00000117317 991 ntBASIC10.62□□□□□ -0.71
Timp3P39876 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.62□□□□□ -0.71
Timp3P39876 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Gm26927-201ENSMUST00000182385 965 ntBASIC10.62□□□□□ -0.71
Timp3P39876 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.62□□□□□ -0.71
Timp3P39876 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Timp3P39876 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC10.62□□□□□ -0.71
Timp3P39876 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Timp3P39876 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Timp3P39876 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm43868-201ENSMUST00000205187 2114 ntBASIC10.61□□□□□ -0.71
Timp3P39876 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Timp3P39876 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
Timp3P39876 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm43463-201ENSMUST00000195967 1803 ntBASIC10.61□□□□□ -0.71
Timp3P39876 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.61□□□□□ -0.71
Timp3P39876 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Timp3P39876 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Gm1335-201ENSMUST00000121653 386 ntBASIC10.61□□□□□ -0.71
Timp3P39876 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC10.61□□□□□ -0.71
Timp3P39876 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.61□□□□□ -0.71
Timp3P39876 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.61□□□□□ -0.71
Timp3P39876 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.61□□□□□ -0.71
Timp3P39876 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Timp3P39876 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Timp3P39876 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Timp3P39876 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Timp3P39876 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.6□□□□□ -0.71
Timp3P39876 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Timp3P39876 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Timp3P39876 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC10.6□□□□□ -0.71
Timp3P39876 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms