Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.55□□□□□ -0.4
Hoxc11P31313 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.55□□□□□ -0.4
Hoxc11P31313 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Hoxc11P31313 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxc11P31313 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gm38266-201ENSMUST00000194931 421 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Gm3961-201ENSMUST00000204425 994 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Hoxc11P31313 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc11P31313 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Hoxc11P31313 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.54□□□□□ -0.4
Hoxc11P31313 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Hoxc11P31313 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.53□□□□□ -0.4
Hoxc11P31313 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm11793-201ENSMUST00000120433 981 ntBASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc11P31313 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.53□□□□□ -0.4
Hoxc11P31313 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Gm9257-201ENSMUST00000221254 232 ntBASIC12.53□□□□□ -0.4
Hoxc11P31313 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.53□□□□□ -0.4
Hoxc11P31313 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Hoxc11P31313 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.53□□□□□ -0.4
Hoxc11P31313 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 90.3 ms