Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm45433-201ENSMUST00000209386 247 ntBASIC14.47□□□□□ -0.09
Col2a1P28481 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.47□□□□□ -0.09
Col2a1P28481 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Gm13142-201ENSMUST00000117213 1453 ntBASIC14.47□□□□□ -0.09
Col2a1P28481 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Col2a1P28481 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Col2a1P28481 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.46□□□□□ -0.09
Col2a1P28481 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.46□□□□□ -0.09
Col2a1P28481 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Col2a1P28481 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Col2a1P28481 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC14.46□□□□□ -0.09
Col2a1P28481 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC14.46□□□□□ -0.09
Col2a1P28481 Mir5120-201ENSMUST00000175020 78 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Gm7003-201ENSMUST00000195089 312 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.46□□□□□ -0.09
Col2a1P28481 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.46□□□□□ -0.09
Col2a1P28481 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Col2a1P28481 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.1
Col2a1P28481 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.46□□□□□ -0.1
Col2a1P28481 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Col2a1P28481 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Col2a1P28481 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col2a1P28481 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.45□□□□□ -0.1
Col2a1P28481 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Col2a1P28481 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col2a1P28481 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Col2a1P28481 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Col2a1P28481 Gm12380-201ENSMUST00000119012 544 ntBASIC14.45□□□□□ -0.1
Col2a1P28481 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.45□□□□□ -0.1
Col2a1P28481 Gm19208-201ENSMUST00000213861 912 ntBASIC14.45□□□□□ -0.1
Col2a1P28481 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.45□□□□□ -0.1
Col2a1P28481 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.45□□□□□ -0.1
Col2a1P28481 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Col2a1P28481 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.45□□□□□ -0.1
Col2a1P28481 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Col2a1P28481 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.45□□□□□ -0.1
Col2a1P28481 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Col2a1P28481 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.44□□□□□ -0.1
Col2a1P28481 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms